Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga12g00540.N1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 865

Length: 1442
ACGTcount: A:0.27, C:0.16, G:0.18, T:0.39


Found at i:1013 original size:14 final size:14

Alignment explanation


    Indices: 994--1023  Score: 51
    Period size: 14  Copynumber: 2.1  Consensus size: 14

        984 CCTTGCAATC

                      *   
        994 AATATAAGAAGTTT
          1 AATATAAGAAATTT

                          
       1008 AATATAAGAAATTT
          1 AATATAAGAAATTT

              
       1022 AA
          1 AA

       1024 CCAACATTTT


Statistics
Matches: 15,  Mismatches: 1, Indels: 0
        0.94            0.06        0.00

Matches are distributed among these distances:
  14   15  1.00

ACGTcount: A:0.57, C:0.00, G:0.10, T:0.33


Consensus pattern (14 bp):   
AATATAAGAAATTT
Done.