Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga12g00860.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 586

Length: 977
ACGTcount: A:0.28, C:0.17, G:0.20, T:0.35


Found at i:846 original size:4 final size:4

Alignment explanation


    Indices: 837--866  Score: 60
    Period size: 4  Copynumber: 7.5  Consensus size: 4

        827 TGGACTGAGG

                                                 
        837 TTTA TTTA TTTA TTTA TTTA TTTA TTTA TT
          1 TTTA TTTA TTTA TTTA TTTA TTTA TTTA TT

        867 GTATATTTAG


Statistics
Matches: 26,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   4   26  1.00

ACGTcount: A:0.23, C:0.00, G:0.00, T:0.77


Consensus pattern (4 bp):   
TTTA

Done.