Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga12g01193.F2

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 620

Length: 1034
ACGTcount: A:0.31, C:0.14, G:0.21, T:0.34


Found at i:741 original size:33 final size:33

Alignment explanation


    Indices: 704--769  Score: 132
    Period size: 33  Copynumber: 2.0  Consensus size: 33

        694 CATTGATCAA

                                             
        704 AATTCCTGATCATCCAATGCAAATGTTCGTTTT
          1 AATTCCTGATCATCCAATGCAAATGTTCGTTTT

                                             
        737 AATTCCTGATCATCCAATGCAAATGTTCGTTTT
          1 AATTCCTGATCATCCAATGCAAATGTTCGTTTT

        770 CTTAAGTCTA


Statistics
Matches: 33,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  33   33  1.00

ACGTcount: A:0.27, C:0.21, G:0.12, T:0.39


Consensus pattern (33 bp):   
AATTCCTGATCATCCAATGCAAATGTTCGTTTT
Done.