Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga12g01300.N1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 556

Length: 927
ACGTcount: A:0.28, C:0.17, G:0.18, T:0.38


Found at i:611 original size:17 final size:17

Alignment explanation


    Indices: 589--623  Score: 70
    Period size: 17  Copynumber: 2.1  Consensus size: 17

        579 TTACGATTTA

                             
        589 TCTCTCAATACTTTTCG
          1 TCTCTCAATACTTTTCG

                             
        606 TCTCTCAATACTTTTCG
          1 TCTCTCAATACTTTTCG

             
        623 T
          1 T

        624 TTGATGTTTT


Statistics
Matches: 18,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  17   18  1.00

ACGTcount: A:0.17, C:0.29, G:0.06, T:0.49


Consensus pattern (17 bp):   
TCTCTCAATACTTTTCG
Done.