Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga12g01372.F4

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 2930
ACGTcount: A:0.27, C:0.20, G:0.20, T:0.33


Found at i:1462 original size:3 final size:3

Alignment explanation


    Indices: 1447--1484  Score: 67
    Period size: 3  Copynumber: 12.7  Consensus size: 3

       1437 TTATCTACAA

                      *                                       
       1447 TAC TAC TAT TAC TAC TAC TAC TAC TAC TAC TAC TAC TA
          1 TAC TAC TAC TAC TAC TAC TAC TAC TAC TAC TAC TAC TA

       1485 TGGAGCACTC


Statistics
Matches: 33,  Mismatches: 2, Indels: 0
        0.94            0.06        0.00

Matches are distributed among these distances:
   3   33  1.00

ACGTcount: A:0.34, C:0.29, G:0.00, T:0.37


Consensus pattern (3 bp):   
TAC

Done.