Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga12g01400.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 4862
ACGTcount: A:0.30, C:0.18, G:0.24, T:0.28


Found at i:4736 original size:3 final size:3

Alignment explanation


    Indices: 4728--4764  Score: 74
    Period size: 3  Copynumber: 12.3  Consensus size: 3

       4718 GATTCAGTGC

                                                             
       4728 TAT TAT TAT TAT TAT TAT TAT TAT TAT TAT TAT TAT T
          1 TAT TAT TAT TAT TAT TAT TAT TAT TAT TAT TAT TAT T

       4765 TTGTAATTTA


Statistics
Matches: 34,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   3   34  1.00

ACGTcount: A:0.32, C:0.00, G:0.00, T:0.68


Consensus pattern (3 bp):   
TAT

Done.