Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga01g00369.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 2123
ACGTcount: A:0.28, C:0.22, G:0.21, T:0.30


Found at i:2061 original size:13 final size:13

Alignment explanation


    Indices: 2043--2068  Score: 52
    Period size: 13  Copynumber: 2.0  Consensus size: 13

       2033 GAGTTCCCTC

                         
       2043 CATGTTTCAGCTT
          1 CATGTTTCAGCTT

                         
       2056 CATGTTTCAGCTT
          1 CATGTTTCAGCTT

       2069 TCATTTTGTA


Statistics
Matches: 13,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  13   13  1.00

ACGTcount: A:0.15, C:0.23, G:0.15, T:0.46


Consensus pattern (13 bp):   
CATGTTTCAGCTT
Done.