Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga12g01508.N1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 863

Length: 1439
ACGTcount: A:0.29, C:0.19, G:0.18, T:0.35


Found at i:420 original size:12 final size:12

Alignment explanation


    Indices: 403--427  Score: 50
    Period size: 12  Copynumber: 2.1  Consensus size: 12

        393 AGCCTGAAGC

                        
        403 ATTTGAAGAATG
          1 ATTTGAAGAATG

                        
        415 ATTTGAAGAATG
          1 ATTTGAAGAATG

             
        427 A
          1 A

        428 GGCAGAAATT


Statistics
Matches: 13,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  12   13  1.00

ACGTcount: A:0.44, C:0.00, G:0.24, T:0.32


Consensus pattern (12 bp):   
ATTTGAAGAATG
Done.