Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga12g01518.R2

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 4807
ACGTcount: A:0.29, C:0.20, G:0.22, T:0.30


Found at i:1756 original size:6 final size:6

Alignment explanation


    Indices: 1745--1772  Score: 56
    Period size: 6  Copynumber: 4.7  Consensus size: 6

       1735 GATGCTTCAA

                                            
       1745 CATCTG CATCTG CATCTG CATCTG CATC
          1 CATCTG CATCTG CATCTG CATCTG CATC

       1773 GAATGTGAAC


Statistics
Matches: 22,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   6   22  1.00

ACGTcount: A:0.18, C:0.36, G:0.14, T:0.32


Consensus pattern (6 bp):   
CATCTG

Done.