Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga12g01610.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 1798
ACGTcount: A:0.32, C:0.16, G:0.21, T:0.30


Found at i:426 original size:6 final size:6

Alignment explanation


    Indices: 417--454  Score: 76
    Period size: 6  Copynumber: 6.3  Consensus size: 6

        407 AGTTGTAGAA

                                                        
        417 GATGGT GATGGT GATGGT GATGGT GATGGT GATGGT GA
          1 GATGGT GATGGT GATGGT GATGGT GATGGT GATGGT GA

        455 AATTGAGGAT


Statistics
Matches: 32,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   6   32  1.00

ACGTcount: A:0.18, C:0.00, G:0.50, T:0.32


Consensus pattern (6 bp):   
GATGGT

Done.