Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga12g01750.P1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 3151
ACGTcount: A:0.28, C:0.18, G:0.22, T:0.31


Found at i:2369 original size:13 final size:13

Alignment explanation


    Indices: 2351--2375  Score: 50
    Period size: 13  Copynumber: 1.9  Consensus size: 13

       2341 TAATCCACAA

                         
       2351 GTTTCGCATGGTG
          1 GTTTCGCATGGTG

                        
       2364 GTTTCGCATGGT
          1 GTTTCGCATGGT

       2376 AGAGGTGTTA


Statistics
Matches: 12,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  13   12  1.00

ACGTcount: A:0.08, C:0.16, G:0.36, T:0.40


Consensus pattern (13 bp):   
GTTTCGCATGGTG
Done.