Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga12g01752.N1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 2268
ACGTcount: A:0.27, C:0.21, G:0.21, T:0.30


Found at i:25 original size:16 final size:16

Alignment explanation


    Indices: 1--31  Score: 53
    Period size: 16  Copynumber: 1.9  Consensus size: 16

                            
          1 ACCAACAACAACCATC
          1 ACCAACAACAACCATC

                *          
         17 ACCAGCAACAACCAT
          1 ACCAACAACAACCAT

         32 ATAATTGCAA


Statistics
Matches: 14,  Mismatches: 1, Indels: 0
        0.93            0.07        0.00

Matches are distributed among these distances:
  16   14  1.00

ACGTcount: A:0.48, C:0.42, G:0.03, T:0.06


Consensus pattern (16 bp):   
ACCAACAACAACCATC
Done.