Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga12g02080.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 633

Length: 1056
ACGTcount: A:0.28, C:0.20, G:0.27, T:0.25


Found at i:35 original size:3 final size:3

Alignment explanation


    Indices: 27--64  Score: 76
    Period size: 3  Copynumber: 12.7  Consensus size: 3

         17 AAACAGTAGA

                                                              
         27 GCG GCG GCG GCG GCG GCG GCG GCG GCG GCG GCG GCG GC
          1 GCG GCG GCG GCG GCG GCG GCG GCG GCG GCG GCG GCG GC

         65 ATCCCCCTCG


Statistics
Matches: 35,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   3   35  1.00

ACGTcount: A:0.00, C:0.34, G:0.66, T:0.00


Consensus pattern (3 bp):   
GCG

Done.