Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga12g02358.N3

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 697

Length: 1162
ACGTcount: A:0.30, C:0.20, G:0.18, T:0.31


Found at i:817 original size:3 final size:3

Alignment explanation


    Indices: 811--849  Score: 51
    Period size: 3  Copynumber: 13.0  Consensus size: 3

        801 ACCCTCAACA

                                          *   *   *            
        811 TCT TCT TCT TCT TCT TCT TCT TCA TCA TCA TCT TCT TCT
          1 TCT TCT TCT TCT TCT TCT TCT TCT TCT TCT TCT TCT TCT

        850 ACTACTCATT


Statistics
Matches: 34,  Mismatches: 2, Indels: 0
        0.94            0.06        0.00

Matches are distributed among these distances:
   3   34  1.00

ACGTcount: A:0.08, C:0.33, G:0.00, T:0.59


Consensus pattern (3 bp):   
TCT

Done.