Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga12g02509.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 3156
ACGTcount: A:0.32, C:0.18, G:0.19, T:0.31


Found at i:1878 original size:6 final size:6

Alignment explanation


    Indices: 1867--1909  Score: 86
    Period size: 6  Copynumber: 7.2  Consensus size: 6

       1857 AGAAATGCCG

                                                              
       1867 ATATGT ATATGT ATATGT ATATGT ATATGT ATATGT ATATGT A
          1 ATATGT ATATGT ATATGT ATATGT ATATGT ATATGT ATATGT A

       1910 AGTATGTATG


Statistics
Matches: 37,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   6   37  1.00

ACGTcount: A:0.35, C:0.00, G:0.16, T:0.49


Consensus pattern (6 bp):   
ATATGT

Done.