Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga12g02510.F2

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 4792
ACGTcount: A:0.30, C:0.20, G:0.19, T:0.32


Found at i:455 original size:6 final size:6

Alignment explanation


    Indices: 444--486  Score: 86
    Period size: 6  Copynumber: 7.2  Consensus size: 6

        434 CATACATACT

                                                              
        444 TACATA TACATA TACATA TACATA TACATA TACATA TACATA T
          1 TACATA TACATA TACATA TACATA TACATA TACATA TACATA T

        487 CGGCATTTCT


Statistics
Matches: 37,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   6   37  1.00

ACGTcount: A:0.49, C:0.16, G:0.00, T:0.35


Consensus pattern (6 bp):   
TACATA

Done.