Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga13g00298.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 736

Length: 1227
ACGTcount: A:0.30, C:0.19, G:0.18, T:0.33


Found at i:97 original size:12 final size:12

Alignment explanation


    Indices: 82--106  Score: 50
    Period size: 12  Copynumber: 2.1  Consensus size: 12

         72 CTTCTTCTTC

                        
         82 TCCTTTTTTTTT
          1 TCCTTTTTTTTT

                        
         94 TCCTTTTTTTTT
          1 TCCTTTTTTTTT

             
        106 T
          1 T

        107 TTTGAATTAC


Statistics
Matches: 13,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  12   13  1.00

ACGTcount: A:0.00, C:0.16, G:0.00, T:0.84


Consensus pattern (12 bp):   
TCCTTTTTTTTT
Done.