Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga13g00393.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 763

Length: 1273
ACGTcount: A:0.27, C:0.22, G:0.22, T:0.29


Found at i:1073 original size:13 final size:13

Alignment explanation


    Indices: 1055--1081  Score: 54
    Period size: 13  Copynumber: 2.1  Consensus size: 13

       1045 TGCTAATGGC

                         
       1055 ACACCGTCATCTT
          1 ACACCGTCATCTT

                         
       1068 ACACCGTCATCTT
          1 ACACCGTCATCTT

             
       1081 A
          1 A

       1082 TTAGGCATGT


Statistics
Matches: 14,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  13   14  1.00

ACGTcount: A:0.26, C:0.37, G:0.07, T:0.30


Consensus pattern (13 bp):   
ACACCGTCATCTT
Done.