Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga13g00469.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 649

Length: 1082
ACGTcount: A:0.29, C:0.20, G:0.19, T:0.33


Found at i:101 original size:14 final size:14

Alignment explanation


    Indices: 78--107  Score: 51
    Period size: 14  Copynumber: 2.1  Consensus size: 14

         68 TTTTAATCTG

                          
         78 TTCTTCTTCTTTTT
          1 TTCTTCTTCTTTTT

                 *        
         92 TTCTTTTTCTTTTT
          1 TTCTTCTTCTTTTT

              
        106 TT
          1 TT

        108 AATTTCTCGA


Statistics
Matches: 15,  Mismatches: 1, Indels: 0
        0.94            0.06        0.00

Matches are distributed among these distances:
  14   15  1.00

ACGTcount: A:0.00, C:0.17, G:0.00, T:0.83


Consensus pattern (14 bp):   
TTCTTCTTCTTTTT
Done.