Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga13g00595.N1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 582

Length: 971
ACGTcount: A:0.31, C:0.18, G:0.21, T:0.30


Found at i:940 original size:13 final size:13

Alignment explanation


    Indices: 924--952  Score: 58
    Period size: 13  Copynumber: 2.2  Consensus size: 13

        914 TTATTGGTGT

                         
        924 AATTTATTCCAAA
          1 AATTTATTCCAAA

                         
        937 AATTTATTCCAAA
          1 AATTTATTCCAAA

               
        950 AAT
          1 AAT

        953 AATAATTATC


Statistics
Matches: 16,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  13   16  1.00

ACGTcount: A:0.48, C:0.14, G:0.00, T:0.38


Consensus pattern (13 bp):   
AATTTATTCCAAA
Done.