Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga13g00859.P1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 607

Length: 1012
ACGTcount: A:0.25, C:0.20, G:0.22, T:0.33


Found at i:89 original size:6 final size:6

Alignment explanation


    Indices: 80--104  Score: 50
    Period size: 6  Copynumber: 4.2  Consensus size: 6

         70 AGTTTCCTTT

                                         
         80 TTTTTC TTTTTC TTTTTC TTTTTC T
          1 TTTTTC TTTTTC TTTTTC TTTTTC T

        105 GTTTGGACGA


Statistics
Matches: 19,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   6   19  1.00

ACGTcount: A:0.00, C:0.16, G:0.00, T:0.84


Consensus pattern (6 bp):   
TTTTTC

Done.