Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga13g01277.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 2084
ACGTcount: A:0.32, C:0.18, G:0.24, T:0.26


Found at i:2029 original size:14 final size:14

Alignment explanation


    Indices: 2010--2036  Score: 54
    Period size: 14  Copynumber: 1.9  Consensus size: 14

       2000 TATGTTTGTT

                          
       2010 TCTTTTTTTTTTTC
          1 TCTTTTTTTTTTTC

                         
       2024 TCTTTTTTTTTTT
          1 TCTTTTTTTTTTT

       2037 ATGTTATTGA


Statistics
Matches: 13,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  14   13  1.00

ACGTcount: A:0.00, C:0.11, G:0.00, T:0.89


Consensus pattern (14 bp):   
TCTTTTTTTTTTTC
Done.