Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga02g00853.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 613

Length: 1022
ACGTcount: A:0.29, C:0.18, G:0.23, T:0.30


Found at i:829 original size:21 final size:21

Alignment explanation


    Indices: 805--846  Score: 84
    Period size: 21  Copynumber: 2.0  Consensus size: 21

        795 ACTGCGAAAA

                                 
        805 AAATTACTCTTTTAACTATTT
          1 AAATTACTCTTTTAACTATTT

                                 
        826 AAATTACTCTTTTAACTATTT
          1 AAATTACTCTTTTAACTATTT

        847 TTTTTTTACA


Statistics
Matches: 21,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  21   21  1.00

ACGTcount: A:0.33, C:0.14, G:0.00, T:0.52


Consensus pattern (21 bp):   
AAATTACTCTTTTAACTATTT
Done.