Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga13g01650.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 951

Length: 1586
ACGTcount: A:0.26, C:0.24, G:0.20, T:0.29


Found at i:76 original size:5 final size:5

Alignment explanation


    Indices: 66--91  Score: 52
    Period size: 5  Copynumber: 5.2  Consensus size: 5

         56 AGTGAGAAAC

                                           
         66 CTGCA CTGCA CTGCA CTGCA CTGCA C
          1 CTGCA CTGCA CTGCA CTGCA CTGCA C

         92 CCTTTTCTCA


Statistics
Matches: 21,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   5   21  1.00

ACGTcount: A:0.19, C:0.42, G:0.19, T:0.19


Consensus pattern (5 bp):   
CTGCA

Done.