Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga13g01711.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 2891
ACGTcount: A:0.29, C:0.19, G:0.20, T:0.33


Found at i:1464 original size:23 final size:23

Alignment explanation


    Indices: 1437--1482  Score: 92
    Period size: 23  Copynumber: 2.0  Consensus size: 23

       1427 TTATTTATCT

                                   
       1437 CTATCTTAAAAGTGTTATCCTGA
          1 CTATCTTAAAAGTGTTATCCTGA

                                   
       1460 CTATCTTAAAAGTGTTATCCTGA
          1 CTATCTTAAAAGTGTTATCCTGA

       1483 TACCATCCAC


Statistics
Matches: 23,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  23   23  1.00

ACGTcount: A:0.30, C:0.17, G:0.13, T:0.39


Consensus pattern (23 bp):   
CTATCTTAAAAGTGTTATCCTGA
Done.