Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga13g01870.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 866

Length: 1444
ACGTcount: A:0.31, C:0.18, G:0.21, T:0.29


Found at i:74 original size:6 final size:6

Alignment explanation


    Indices: 65--98  Score: 68
    Period size: 6  Copynumber: 5.7  Consensus size: 6

         55 CTTTGTCCCC

                                                   
         65 CCATTT CCATTT CCATTT CCATTT CCATTT CCAT
          1 CCATTT CCATTT CCATTT CCATTT CCATTT CCAT

         99 CTCATCCTTC


Statistics
Matches: 28,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   6   28  1.00

ACGTcount: A:0.18, C:0.35, G:0.00, T:0.47


Consensus pattern (6 bp):   
CCATTT

Done.