Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga13g02243.F4

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 636

Length: 1061
ACGTcount: A:0.26, C:0.18, G:0.20, T:0.36


Found at i:210 original size:14 final size:14

Alignment explanation


    Indices: 191--217  Score: 54
    Period size: 14  Copynumber: 1.9  Consensus size: 14

        181 TTGAGTTTGC

                          
        191 AGATCTATTTTATG
          1 AGATCTATTTTATG

                         
        205 AGATCTATTTTAT
          1 AGATCTATTTTAT

        218 CTATTTTGTG


Statistics
Matches: 13,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  14   13  1.00

ACGTcount: A:0.30, C:0.07, G:0.11, T:0.52


Consensus pattern (14 bp):   
AGATCTATTTTATG
Done.