Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga13g02262.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 849

Length: 1415
ACGTcount: A:0.26, C:0.26, G:0.20, T:0.28


Found at i:1077 original size:6 final size:6

Alignment explanation


    Indices: 1031--1074  Score: 70
    Period size: 6  Copynumber: 7.3  Consensus size: 6

       1021 ATCTTCCTCC

                                                 *      *      
       1031 CCTTCA CCTTCA CCTTCA CCTTCA CCTTCA CCATCA CCATCA CC
          1 CCTTCA CCTTCA CCTTCA CCTTCA CCTTCA CCTTCA CCTTCA CC

       1075 ATCGACGGCA


Statistics
Matches: 37,  Mismatches: 1, Indels: 0
        0.97            0.03        0.00

Matches are distributed among these distances:
   6   37  1.00

ACGTcount: A:0.20, C:0.52, G:0.00, T:0.27


Consensus pattern (6 bp):   
CCTTCA
Done.