Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga13g02275.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 2644
ACGTcount: A:0.27, C:0.22, G:0.22, T:0.29


Found at i:2223 original size:16 final size:16

Alignment explanation


    Indices: 2202--2232  Score: 53
    Period size: 16  Copynumber: 1.9  Consensus size: 16

       2192 AACATATATG

                            
       2202 TATATACATGTGTGTA
          1 TATATACATGTGTGTA

                  *        
       2218 TATATATATGTGTGT
          1 TATATACATGTGTGT

       2233 GTGTGGCATT


Statistics
Matches: 14,  Mismatches: 1, Indels: 0
        0.93            0.07        0.00

Matches are distributed among these distances:
  16   14  1.00

ACGTcount: A:0.29, C:0.03, G:0.19, T:0.48


Consensus pattern (16 bp):   
TATATACATGTGTGTA
Done.