Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga13g02391.F2

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 2456
ACGTcount: A:0.25, C:0.19, G:0.25, T:0.30


Found at i:2361 original size:5 final size:5

Alignment explanation


    Indices: 2351--2375  Score: 50
    Period size: 5  Copynumber: 5.0  Consensus size: 5

       2341 TTACTATCAG

                                         
       2351 CTGTA CTGTA CTGTA CTGTA CTGTA
          1 CTGTA CTGTA CTGTA CTGTA CTGTA

       2376 ATGGTATAAT


Statistics
Matches: 20,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   5   20  1.00

ACGTcount: A:0.20, C:0.20, G:0.20, T:0.40


Consensus pattern (5 bp):   
CTGTA

Done.