Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga02g00920.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 2013
ACGTcount: A:0.31, C:0.19, G:0.23, T:0.28


Found at i:529 original size:14 final size:14

Alignment explanation


    Indices: 510--539  Score: 60
    Period size: 14  Copynumber: 2.1  Consensus size: 14

        500 TTGTTGCTAA

                          
        510 GTTAGGAAACTTGG
          1 GTTAGGAAACTTGG

                          
        524 GTTAGGAAACTTGG
          1 GTTAGGAAACTTGG

              
        538 GT
          1 GT

        540 GTGGTGAAGG


Statistics
Matches: 16,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  14   16  1.00

ACGTcount: A:0.27, C:0.07, G:0.37, T:0.30


Consensus pattern (14 bp):   
GTTAGGAAACTTGG
Done.