Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga13g02458.F2

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 1988
ACGTcount: A:0.28, C:0.18, G:0.23, T:0.31


Found at i:1847 original size:3 final size:3

Alignment explanation


    Indices: 1841--1872  Score: 64
    Period size: 3  Copynumber: 10.7  Consensus size: 3

       1831 TTTTTTTTTT

                                                      
       1841 TTG TTG TTG TTG TTG TTG TTG TTG TTG TTG TT
          1 TTG TTG TTG TTG TTG TTG TTG TTG TTG TTG TT

       1873 TGCCTTTTGT


Statistics
Matches: 29,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   3   29  1.00

ACGTcount: A:0.00, C:0.00, G:0.31, T:0.69


Consensus pattern (3 bp):   
TTG

Done.