Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga13g02481.F2

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 625

Length: 1043
ACGTcount: A:0.31, C:0.18, G:0.23, T:0.27


Found at i:33 original size:7 final size:7

Alignment explanation


    Indices: 23--50  Score: 56
    Period size: 7  Copynumber: 4.0  Consensus size: 7

         13 CCCCAAAAGC

                   
         23 AAAAAAT
          1 AAAAAAT

                   
         30 AAAAAAT
          1 AAAAAAT

                   
         37 AAAAAAT
          1 AAAAAAT

                   
         44 AAAAAAT
          1 AAAAAAT

         51 GAAGTCGATT


Statistics
Matches: 21,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   7   21  1.00

ACGTcount: A:0.86, C:0.00, G:0.00, T:0.14


Consensus pattern (7 bp):   
AAAAAAT

Done.