Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga13g02524.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 582

Length: 971
ACGTcount: A:0.29, C:0.17, G:0.25, T:0.29


Found at i:44 original size:14 final size:14

Alignment explanation


    Indices: 25--52  Score: 56
    Period size: 14  Copynumber: 2.0  Consensus size: 14

         15 TTTTAGCAAA

                          
         25 ATGGAGTCTTCAAG
          1 ATGGAGTCTTCAAG

                          
         39 ATGGAGTCTTCAAG
          1 ATGGAGTCTTCAAG

         53 GCATGACTGC


Statistics
Matches: 14,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  14   14  1.00

ACGTcount: A:0.29, C:0.14, G:0.29, T:0.29


Consensus pattern (14 bp):   
ATGGAGTCTTCAAG
Done.