Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga13g02590.N1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 637

Length: 1062
ACGTcount: A:0.34, C:0.19, G:0.21, T:0.27


Found at i:179 original size:4 final size:4

Alignment explanation


    Indices: 170--196  Score: 54
    Period size: 4  Copynumber: 6.8  Consensus size: 4

        160 GGTATGCATC

                                             
        170 ACAT ACAT ACAT ACAT ACAT ACAT ACA
          1 ACAT ACAT ACAT ACAT ACAT ACAT ACA

        197 CTTATATGTC


Statistics
Matches: 23,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   4   23  1.00

ACGTcount: A:0.52, C:0.26, G:0.00, T:0.22


Consensus pattern (4 bp):   
ACAT

Done.