Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga14g00008.N2

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 487

Length: 812
ACGTcount: A:0.31, C:0.25, G:0.15, T:0.29


Found at i:464 original size:30 final size:30

Alignment explanation


    Indices: 428--506  Score: 149
    Period size: 30  Copynumber: 2.6  Consensus size: 30

        418 TTGGATCTTC

                                          
        428 CCACACGGGCTGGATACACACTCGTGTGAG
          1 CCACACGGGCTGGATACACACTCGTGTGAG

                                          
        458 CCACACGGGCTGGATACACACTCGTGTGAG
          1 CCACACGGGCTGGATACACACTCGTGTGAG

                          *    
        488 CCACACGGGCTGGACACAC
          1 CCACACGGGCTGGATACAC

        507 GGTCATGTGT


Statistics
Matches: 48,  Mismatches: 1, Indels: 0
        0.98            0.02        0.00

Matches are distributed among these distances:
  30   48  1.00

ACGTcount: A:0.24, C:0.33, G:0.29, T:0.14


Consensus pattern (30 bp):   
CCACACGGGCTGGATACACACTCGTGTGAG
Done.