Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga14g00037.M1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 5289
ACGTcount: A:0.30, C:0.18, G:0.21, T:0.32


Found at i:4509 original size:2 final size:2

Alignment explanation


    Indices: 4504--4529  Score: 52
    Period size: 2  Copynumber: 13.0  Consensus size: 2

       4494 GATATATATA

                                                  
       4504 TG TG TG TG TG TG TG TG TG TG TG TG TG
          1 TG TG TG TG TG TG TG TG TG TG TG TG TG

       4530 CAGATTAAAA


Statistics
Matches: 24,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   2   24  1.00

ACGTcount: A:0.00, C:0.00, G:0.50, T:0.50


Consensus pattern (2 bp):   
TG

Done.