Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga14g00305.F2

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 3576
ACGTcount: A:0.29, C:0.18, G:0.20, T:0.34


Found at i:3287 original size:2 final size:2

Alignment explanation


    Indices: 3280--3304  Score: 50
    Period size: 2  Copynumber: 12.5  Consensus size: 2

       3270 GAAAACTACA

                                                 
       3280 TC TC TC TC TC TC TC TC TC TC TC TC T
          1 TC TC TC TC TC TC TC TC TC TC TC TC T

       3305 GATGTATATG


Statistics
Matches: 23,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   2   23  1.00

ACGTcount: A:0.00, C:0.48, G:0.00, T:0.52


Consensus pattern (2 bp):   
TC

Done.