Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga14g00503.N1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 2463
ACGTcount: A:0.32, C:0.18, G:0.19, T:0.31


Found at i:2400 original size:10 final size:10

Alignment explanation


    Indices: 2385--2409  Score: 50
    Period size: 10  Copynumber: 2.5  Consensus size: 10

       2375 ATTTTTTTAT

                      
       2385 TTTATAATAA
          1 TTTATAATAA

                      
       2395 TTTATAATAA
          1 TTTATAATAA

                 
       2405 TTTAT
          1 TTTAT

       2410 TTAATTAAAT


Statistics
Matches: 15,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  10   15  1.00

ACGTcount: A:0.44, C:0.00, G:0.00, T:0.56


Consensus pattern (10 bp):   
TTTATAATAA
Done.