Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga14g00613.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 3118
ACGTcount: A:0.27, C:0.17, G:0.20, T:0.35


Found at i:2554 original size:3 final size:3

Alignment explanation


    Indices: 2548--2582  Score: 70
    Period size: 3  Copynumber: 11.7  Consensus size: 3

       2538 AGTGTTGTTT

                                                          
       2548 ATG ATG ATG ATG ATG ATG ATG ATG ATG ATG ATG AT
          1 ATG ATG ATG ATG ATG ATG ATG ATG ATG ATG ATG AT

       2583 CTACTCTAAG


Statistics
Matches: 32,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   3   32  1.00

ACGTcount: A:0.34, C:0.00, G:0.31, T:0.34


Consensus pattern (3 bp):   
ATG

Done.