Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga14g00915.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 625

Length: 1043
ACGTcount: A:0.30, C:0.18, G:0.22, T:0.30


Found at i:450 original size:18 final size:18

Alignment explanation


    Indices: 427--462  Score: 72
    Period size: 18  Copynumber: 2.0  Consensus size: 18

        417 ACCTGGAGTT

                              
        427 CAACTGAATAAAAGAGAC
          1 CAACTGAATAAAAGAGAC

                              
        445 CAACTGAATAAAAGAGAC
          1 CAACTGAATAAAAGAGAC

        463 TGTTCTCATT


Statistics
Matches: 18,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  18   18  1.00

ACGTcount: A:0.56, C:0.17, G:0.17, T:0.11


Consensus pattern (18 bp):   
CAACTGAATAAAAGAGAC
Done.