Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga14g01041.F6

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 4053
ACGTcount: A:0.28, C:0.20, G:0.20, T:0.32


Found at i:1926 original size:1 final size:1

Alignment explanation


    Indices: 1920--1956  Score: 56
    Period size: 1  Copynumber: 37.0  Consensus size: 1

       1910 TGGATTAAGC

                                       *   *     
       1920 AAAAAAAAAAAAAAAAAAAAAAAAAAACAAAGAAAAA
          1 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

       1957 GAGAAAAGTC


Statistics
Matches: 32,  Mismatches: 4, Indels: 0
        0.89            0.11        0.00

Matches are distributed among these distances:
   1   32  1.00

ACGTcount: A:0.95, C:0.03, G:0.03, T:0.00


Consensus pattern (1 bp):   
A

Done.