Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga01g00412.N1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 562

Length: 937
ACGTcount: A:0.34, C:0.20, G:0.14, T:0.31


Found at i:637 original size:22 final size:22

Alignment explanation


    Indices: 612--655  Score: 88
    Period size: 22  Copynumber: 2.0  Consensus size: 22

        602 AAAGAGTATG

                                  
        612 TAACAATTGCTGCCAGTACAAT
          1 TAACAATTGCTGCCAGTACAAT

                                  
        634 TAACAATTGCTGCCAGTACAAT
          1 TAACAATTGCTGCCAGTACAAT

        656 ACTGATACCT


Statistics
Matches: 22,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  22   22  1.00

ACGTcount: A:0.36, C:0.23, G:0.14, T:0.27


Consensus pattern (22 bp):   
TAACAATTGCTGCCAGTACAAT
Done.