Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga14g01122.P12

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 2905
ACGTcount: A:0.30, C:0.17, G:0.20, T:0.33


Found at i:1254 original size:2 final size:2

Alignment explanation


    Indices: 1247--1272  Score: 52
    Period size: 2  Copynumber: 13.0  Consensus size: 2

       1237 TGTTAAGGAT

                                                  
       1247 TC TC TC TC TC TC TC TC TC TC TC TC TC
          1 TC TC TC TC TC TC TC TC TC TC TC TC TC

       1273 ATTGTAAGTA


Statistics
Matches: 24,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   2   24  1.00

ACGTcount: A:0.00, C:0.50, G:0.00, T:0.50


Consensus pattern (2 bp):   
TC

Done.