Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga14g01196.F3

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 5038
ACGTcount: A:0.27, C:0.22, G:0.23, T:0.28


Found at i:4852 original size:14 final size:14

Alignment explanation


    Indices: 4833--4863  Score: 53
    Period size: 14  Copynumber: 2.2  Consensus size: 14

       4823 TTTGAATTAT

                          
       4833 AATGCCACTAATCC
          1 AATGCCACTAATCC

                  *       
       4847 AATGCCGCTAATCC
          1 AATGCCACTAATCC

               
       4861 AAT
          1 AAT

       4864 AGTTTAGATA


Statistics
Matches: 16,  Mismatches: 1, Indels: 0
        0.94            0.06        0.00

Matches are distributed among these distances:
  14   16  1.00

ACGTcount: A:0.35, C:0.32, G:0.10, T:0.23


Consensus pattern (14 bp):   
AATGCCACTAATCC
Done.