Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga14g01228.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 565

Length: 943
ACGTcount: A:0.33, C:0.16, G:0.25, T:0.26


Found at i:317 original size:14 final size:14

Alignment explanation


    Indices: 298--326  Score: 58
    Period size: 14  Copynumber: 2.1  Consensus size: 14

        288 TACAATATAT

                          
        298 ATAAGAATTATACG
          1 ATAAGAATTATACG

                          
        312 ATAAGAATTATACG
          1 ATAAGAATTATACG

             
        326 A
          1 A

        327 ATCCATCTGT


Statistics
Matches: 15,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  14   15  1.00

ACGTcount: A:0.52, C:0.07, G:0.14, T:0.28


Consensus pattern (14 bp):   
ATAAGAATTATACG
Done.