Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga14g01424.N1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 2068
ACGTcount: A:0.18, C:0.17, G:0.21, T:0.44


Found at i:1027 original size:15 final size:15

Alignment explanation


    Indices: 1007--1036  Score: 60
    Period size: 15  Copynumber: 2.0  Consensus size: 15

        997 TTGTAAGCGG

                           
       1007 ACTGTTAAACTAGTT
          1 ACTGTTAAACTAGTT

                           
       1022 ACTGTTAAACTAGTT
          1 ACTGTTAAACTAGTT

       1037 CTTTCTTTTT


Statistics
Matches: 15,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  15   15  1.00

ACGTcount: A:0.33, C:0.13, G:0.13, T:0.40


Consensus pattern (15 bp):   
ACTGTTAAACTAGTT
Done.