Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga02g01099.F5

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 2152
ACGTcount: A:0.28, C:0.17, G:0.23, T:0.32


Found at i:1311 original size:3 final size:3

Alignment explanation


    Indices: 1305--1334  Score: 60
    Period size: 3  Copynumber: 10.0  Consensus size: 3

       1295 ACGGGGGTTT

                                                   
       1305 CTG CTG CTG CTG CTG CTG CTG CTG CTG CTG
          1 CTG CTG CTG CTG CTG CTG CTG CTG CTG CTG

       1335 TAATGGATGA


Statistics
Matches: 27,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   3   27  1.00

ACGTcount: A:0.00, C:0.33, G:0.33, T:0.33


Consensus pattern (3 bp):   
CTG

Done.