Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga14g01835.P1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 978

Length: 1630
ACGTcount: A:0.31, C:0.16, G:0.23, T:0.30


Found at i:736 original size:26 final size:26

Alignment explanation


    Indices: 702--754  Score: 97
    Period size: 26  Copynumber: 2.0  Consensus size: 26

        692 AAACTATTAA

                                      
        702 TAATGTTAAATATATTTTATTAATTT
          1 TAATGTTAAATATATTTTATTAATTT

                *                     
        728 TAATTTTAAATATATTTTATTAATTT
          1 TAATGTTAAATATATTTTATTAATTT

             
        754 T
          1 T

        755 TGAAGTTTTT


Statistics
Matches: 26,  Mismatches: 1, Indels: 0
        0.96            0.04        0.00

Matches are distributed among these distances:
  26   26  1.00

ACGTcount: A:0.38, C:0.00, G:0.02, T:0.60


Consensus pattern (26 bp):   
TAATGTTAAATATATTTTATTAATTT
Done.