Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga02g01285.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 3184
ACGTcount: A:0.29, C:0.18, G:0.23, T:0.29


Found at i:613 original size:6 final size:6

Alignment explanation


    Indices: 604--631  Score: 56
    Period size: 6  Copynumber: 4.7  Consensus size: 6

        594 GATAAGTTCG

                                            
        604 GGGAGA GGGAGA GGGAGA GGGAGA GGGA
          1 GGGAGA GGGAGA GGGAGA GGGAGA GGGA

        632 CCACAGGAAA


Statistics
Matches: 22,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   6   22  1.00

ACGTcount: A:0.32, C:0.00, G:0.68, T:0.00


Consensus pattern (6 bp):   
GGGAGA

Done.